[BBF Standards] Sharing BioBrick parts across computer networks?

Bryan Bishop kanzure at gmail.com
Sun Jan 27 19:01:57 EST 2008


On Sunday 27 January 2008, Drew Endy wrote:
> At the November BBF workshop you expressed an interest in working  
> together on standard(s) that define how BioBrick parts are shared  
> across computer networks / software tools.  Has there been any  

Some brief notes on this topic:

- need to specify a centralization system for the distribution of 
related information, such as from the public govt databases (PubChem, 
the many metabolic pathway databases like BioCyc, etc.),

- perhaps an XML standard for specifying dependencies, resultant protein 
structures, and DOI/RDF links for people already working on mods

- http://obofoundry.org/ for bio ontologies; apply to BioBricks

Any other thoughts?

- Bryan
________________________________________
Bryan Bishop
http://heybryan.org/



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